BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002E10SP1|AL424984
(639 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1208 0.0
>3x_Contig1619
Length = 7770
Score = 1208 bits (600), Expect = 0.0
Identities = 624/641 (97%), Gaps = 2/641 (0%)
Strand = Plus / Minus
Query: 1 aactatgttcttatgagttcgactctcatattttccgttcatttttctatatttttatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5798 aactatgttcttatgagttcgactctcatattttccgttcatttttctatatttttatat 5739
Query: 61 ataattataggtgaatatatttcaaaggtagaaagaatgcttgtggcgcgttaaatctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5738 ataattataggtgaatatatttcaaaggtagaaagaatgcttgtggcgcgttaaatctga 5679
Query: 121 gttcaattctcagtattcaccctttgccccaaatgcgacatcctcatagggatgatgcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5678 gttcaattctcagtattcaccctttgccccaaatgcgacatcctcatagggatgatgcat 5619
Query: 181 ttggggcttatataaatkaatatctacccgcggcaccccccgaag--aggtgaccgcggg 238
||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5618 ttggggcttatataaattaatatctacccgcggcaccccccgaagggaggtgaccgcggg 5559
Query: 239 aaattacttaataaatattaggtaattttatactattatataaatatataataacttgta 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5558 aaattacttaataaatattaggtaattttatactattatataaatatataataacttgta 5499
Query: 299 tagtttaattggttaaaacattcgtctcataagcgaagtatataggttcaagtcccatta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5498 tagtttaattggttaaaacattcgtctcataagcgaagtatataggttcaagtcccatta 5439
Query: 359 taagtattaamaatataatattatratavgartataatatatttcttgcaattctttata 418
|||||||||| ||||||||||||| ||| || ||||||||||||||||||||||||||||
Sbjct: 5438 taagtattaaaaatataatattataataagaatataatatatttcttgcaattctttata 5379
Query: 419 aaaattacgttacgaaagtggataataatatatvrgaktatccgcaaataatacaatgta 478
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 5378 aaaattacgttacgaaagtggataataatatataagattatccgcaaataatacaatgta 5319
Query: 479 ttatttgcggtaatttattaaataatarccccgcggactcatcatcctactaaagtagaa 538
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5318 ttatttgcggtaatttattaaataataaccccgcggactcatcatcctactaaagtagaa 5259
Query: 539 tgagagccgcgggaaatkataavtvgkktcccccccccccgcggtctcctacccggtata 598
||||||||||||||||| |||| | | ||||||||||||||||||||||||||||||||
Sbjct: 5258 tgagagccgcgggaaattataaatagtttcccccccccccgcggtctcctacccggtata 5199
Query: 599 caccggtatacaccggkataggtgccgcggggaatataata 639
|||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5198 caccggtatacaccggtataggtgccgcggggaatataata 5158
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.713 1.32
Gapped
Lambda K H
1.40 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5414
Number of Sequences: 1807
Number of extensions: 5414
Number of successful extensions: 173
Number of sequences better than 1.0e-20: 1
length of query: 639
length of database: 10,358,551
effective HSP length: 16
effective length of query: 623
effective length of database: 10,329,639
effective search space: 6435365097
effective search space used: 6435365097
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 49 (99.1 bits)